ALE "Gutenberg Children Books" 2019-04-04 50_clusters, MWC=1 6x reproducibility check (old server)

"Gutenberg Children Books" corpus, new "LG-E-noQuotes" dataset (GC_LGEnglish_noQuotes_fullyParsed.ull),
trash filter off: min_word_count = 1, max_sentence_length off, Link Grammar 5.5.1.
Server 88, fresh clone of singnet repository, fresh ull environment ~ 2018-03-18 Check 2018-04-03 results for MWC=1

This notebook is shared as static cALEd-50c-MWC=1-GCB-LG-E-noQuotes-S88-2019-04-04.html.
Output data shared via cALEd-50c-MWC=1-GCB-LG-E-noQuotes-S88-2019-04-04 directory.

Basic settings

In [1]:
import os, sys, time
module_path = os.path.abspath(os.path.join('..'))
if module_path not in sys.path: sys.path.append(module_path)
from src.grammar_learner.utl import UTC, test_stats
from src.grammar_learner.read_files import check_dir, check_corpus
from src.grammar_learner.write_files import list2file
from src.grammar_learner.widgets import html_table
from src.grammar_learner.pqa_table import table_rows, params, wide_rows
tmpath = module_path + '/tmp/'
check_dir(tmpath, True, 'none')
start = time.time()
runs = (1,1)
print(UTC(), ':: module_path:', module_path)

2019-04-04 11:04:43 UTC :: module_path: /home/obaskov/88/language-learning

Corpus test settings

In [2]:
corpus = 'GCB' # 'Gutenberg-Children-Books' 
dataset = 'LG-E-noQuotes'  # 'LG-E-clean'
kwargs = {
    'left_wall'     :   ''          ,
    'period'        :   False       ,
    'context'       :   1           ,   # 1: connector-based word space
    'min_word_count':   1           ,   # 31,21,11,6,1
    'word_space'    :   'sparse'    ,
    'clustering'    :   ['agglomerative', 'ward'],
    'clustering_metric' : ['silhouette', 'cosine'],
    'cluster_range' :   [50]        ,
    'min_word_count':   1           ,
    'top_level'     :   0.01        ,
    'grammar_rules' :   2           ,   # disjunct-based grammar rules
    'max_disjuncts' :   1000000     ,   # off
    'stop_words'    :   []          ,
    'tmpath'        :   tmpath      ,
    'verbose'       :   'log+'      ,
    'template_path' :   'poc-turtle',
    'linkage_limit' :   1000        }
rp = module_path + '/data/GCB/LG-E-noQuotes/GC_LGEnglish_noQuotes_fullyParsed.ull'
cp = rp  # corpus path = reference_path
out_dir = module_path + '/output/' + 'cALEd-50c-MWC=1-GCB-LG-E-noQuotes-S88-' + str(UTC())[:10]
print(UTC(), '\n', out_dir)

2019-04-04 11:04:43 UTC 
 /home/obaskov/88/language-learning/output/cALEd-50c-MWC=1-GCB-LG-E-noQuotes-S88-2019-04-04

Tests: min_word_count = 1 x6 times -- Check reproducibility

In [4]:
display(html_table([header] + a)); print(test_stats(log))
CorpusParsingSpaceLinkageAffinityG12nThresholdRulesMWCNNSIPAPQF1Top 5 cluster sizes
GCBLG-E-noQuotescALWEdwardeuclideannone---501---0.089%61%0.65[10050, 7610, 1683, 1370, 539]
Cleaned dictionary: 22641 words, grammar learn time: 01:35:06, grammar test time: 00:50:48
In [6]:
display(html_table([header] + a)); print(test_stats(log))
CorpusParsingSpaceLinkageAffinityG12nThresholdRulesMWCNNSIPAPQF1Top 5 cluster sizes
GCBLG-E-noQuotescALWEdwardeuclideannone---501---0.089%61%0.65[10050, 7610, 1683, 1370, 539]
Cleaned dictionary: 22641 words, grammar learn time: 01:35:31, grammar test time: 00:52:32
In [8]:
display(html_table([header] + a)); print(test_stats(log))
CorpusParsingSpaceLinkageAffinityG12nThresholdRulesMWCNNSIPAPQF1Top 5 cluster sizes
GCBLG-E-noQuotescALWEdwardeuclideannone---501---0.089%61%0.65[10050, 7610, 1683, 1370, 539]
Cleaned dictionary: 22641 words, grammar learn time: 01:35:57, grammar test time: 00:50:26
In [12]:
display(html_table([header] + a)); print(test_stats(log))
CorpusParsingSpaceLinkageAffinityG12nThresholdRulesMWCNNSIPAPQF1Top 5 cluster sizes
GCBLG-E-noQuotescALWEdwardeuclideannone---501---0.089%61%0.65[10050, 7610, 1683, 1370, 539]
Cleaned dictionary: 22641 words, grammar learn time: 01:34:31, grammar test time: 00:50:25
In [14]:
display(html_table([header] + a)); print(test_stats(log))
CorpusParsingSpaceLinkageAffinityG12nThresholdRulesMWCNNSIPAPQF1Top 5 cluster sizes
GCBLG-E-noQuotescALWEdwardeuclideannone---501---0.089%61%0.65[10050, 7610, 1683, 1370, 539]
Cleaned dictionary: 22641 words, grammar learn time: 01:35:35, grammar test time: 00:51:32
In [16]:
display(html_table([header] + a)); print(test_stats(log))
CorpusParsingSpaceLinkageAffinityG12nThresholdRulesMWCNNSIPAPQF1Top 5 cluster sizes
GCBLG-E-noQuotescALWEdwardeuclideannone---501---0.089%61%0.65[10050, 7610, 1683, 1370, 539]
Cleaned dictionary: 22641 words, grammar learn time: 01:37:24, grammar test time: 00:51:17

Save results

In [17]:
display(html_table([header] + table))
CorpusParsingSpaceLinkageAffinityG12nThresholdRulesMWCNNSIPAPQF1Top 5 cluster sizes
GCBLG-E-noQuotescALWEdwardeuclideannone---501---0.089%61%0.65[10050, 7610, 1683, 1370, 539]
GCBLG-E-noQuotescALWEdwardeuclideannone---501---0.089%61%0.65[10050, 7610, 1683, 1370, 539]
GCBLG-E-noQuotescALWEdwardeuclideannone---501---0.089%61%0.65[10050, 7610, 1683, 1370, 539]
GCBLG-E-noQuotescALWEdwardeuclideannone---501---0.089%61%0.65[10050, 7610, 1683, 1370, 539]
GCBLG-E-noQuotescALWEdwardeuclideannone---501---0.089%61%0.65[10050, 7610, 1683, 1370, 539]
GCBLG-E-noQuotescALWEdwardeuclideannone---501---0.089%61%0.65[10050, 7610, 1683, 1370, 539]
In [18]:
print(UTC(), ':: 6 tests finished, elapsed', str(round((time.time()-start)/3600.0, 1)), 'hours')
table_str = list2file(table, out_dir + '/all_tests_table.txt')
print('Results saved to', out_dir + '/all_tests_table.txt')

2019-04-05 01:45:54 UTC :: 6 tests finished, elapsed 14.7 hours
Results saved to /home/obaskov/88/language-learning/output/cALEd-50c-MWC=1-GCB-LG-E-noQuotes-S88-2019-04-04/all_tests_table.txt